Search results for "Multivariate time serie"

showing 10 items of 19 documents

An Information-Theoretic Framework to Map the Spatiotemporal Dynamics of the Scalp Electroencephalogram

2016

We present the first application of the emerging framework of information dynamics to the characterization of the electroencephalography (EEG) activity. The framework provides entropy-based measures of information storage (self entropy, SE) and information transfer (joint transfer entropy (TE) and partial TE), which are applied here to detect complex dynamics of individual EEG sensors and causal interactions between different sensors. The measures are implemented according to a model-free and fully multivariate formulation of the framework, allowing the detection of nonlinear dynamics and direct links. Moreover, to deal with the issue of volume conduction, a compensation for instantaneous e…

AdultMaleInformation transferEntropyComputation0206 medical engineeringInformation TheoryBiomedical Engineering02 engineering and technologyScalp electroencephalogramElectroencephalographyMachine learningcomputer.software_genreEEG propagationYoung Adult03 medical and health sciences0302 clinical medicinevolume conductionmedicineHumansCausal connectivitytransfer entropy (TE)MathematicsBrain MappingScalpmedicine.diagnostic_testbusiness.industryBrainElectroencephalographySignal Processing Computer-AssistedPattern recognitioncomplex dynamic020601 biomedical engineeringmultivariate time series analysiComplex dynamicsNonlinear systemSettore ING-INF/06 - Bioingegneria Elettronica E InformaticaFemaleentropy estimationTransfer entropyArtificial intelligenceInformation dynamicsbusinesscomputer030217 neurology & neurosurgeryIEEE Transactions on Biomedical Engineering
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Lag-specific transfer entropy as a tool to assess cardiovascular and cardiorespiratory information transfer

2014

In the study of interacting physiological systems, model-free tools for time series analysis are fundamental to provide a proper description of how the coupling among systems arises from the multiple involved regulatory mechanisms. This study presents an approach which evaluates direction, magnitude, and exact timing of the information transfer between two time series belonging to a multivariate dataset. The approach performs a decomposition of the well-known transfer entropy (TE) which achieves 1) identifying, according to a lag-specific information-theoretic formulation of the concept of Granger causality, the set of time lags associated with significant information transfer, and 2) assig…

AdultMaleInformation transferMultivariate statisticsDynamical systems theoryDatabases FactualComputer sciencePhysiologyEntropyBiomedical EngineeringBlood Pressuredynamical systemYoung AdultGranger causalityControl theoryHumansAutonomic nervous systemmultivariate time serieTime seriesmutual informationcardiovascular controlconditional entropy (CE)RespirationModels CardiovascularComputational BiologyHeartMutual informationCausalityNonlinear systemSettore ING-INF/06 - Bioingegneria Elettronica E InformaticaGranger causalityTransfer entropy
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Estimation of Granger causality through Artificial Neural Networks: applications to physiological systems and chaotic electronic oscillators

2021

One of the most challenging problems in the study of complex dynamical systems is to find the statistical interdependencies among the system components. Granger causality (GC) represents one of the most employed approaches, based on modeling the system dynamics with a linear vector autoregressive (VAR) model and on evaluating the information flow between two processes in terms of prediction error variances. In its most advanced setting, GC analysis is performed through a state-space (SS) representation of the VAR model that allows to compute both conditional and unconditional forms of GC by solving only one regression problem. While this problem is typically solved through Ordinary Least Sq…

Artificial neural networks; Chaotic oscillators; Granger causality; Multivariate time series analysis; Network physiology; Penalized regression techniques; Remote synchronization; State-space models; Stochastic gradient descent L1; Vector autoregressive modelGeneral Computer ScienceDynamical systems theoryComputer science02 engineering and technologyChaotic oscillatorsPenalized regression techniquesNetwork topologySettore ING-INF/01 - ElettronicaMultivariate time series analysisVector autoregression03 medical and health sciences0302 clinical medicineScientific Computing and Simulation0202 electrical engineering electronic engineering information engineeringRepresentation (mathematics)Optimization Theory and ComputationNetwork physiologyState-space modelsArtificial neural networkArtificial neural networksData ScienceTheory and Formal MethodsQA75.5-76.95Stochastic gradient descent L1Granger causality State-space models Vector autoregressive model Artificial neural networks Stochastic gradient descent L1 Multivariate time series analysis Network physiology Remote synchronization Chaotic oscillators Penalized regression techniquesRemote synchronizationStochastic gradient descentAutoregressive modelAlgorithms and Analysis of AlgorithmsVector autoregressive modelElectronic computers. Computer scienceSettore ING-INF/06 - Bioingegneria Elettronica E InformaticaGranger causality020201 artificial intelligence & image processingGradient descentAlgorithm030217 neurology & neurosurgeryPeerJ Computer Science
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Multiscale Information Decomposition: Exact Computation for Multivariate Gaussian Processes

2017

Exploiting the theory of state space models, we derive the exact expressions of the information transfer, as well as redundant and synergistic transfer, for coupled Gaussian processes observed at multiple temporal scales. All of the terms, constituting the frameworks known as interaction information decomposition and partial information decomposition, can thus be analytically obtained for different time scales from the parameters of the VAR model that fits the processes. We report the application of the proposed methodology firstly to benchmark Gaussian systems, showing that this class of systems may generate patterns of information decomposition characterized by prevalently redundant or sy…

FOS: Computer and information sciencesInformation transferComputer scienceGaussianSocial SciencesGeneral Physics and AstronomyInformation theory01 natural sciences010305 fluids & plasmasState spaceStatistical physicslcsh:Scienceinformation theorymultiscale entropylcsh:QC1-999Interaction informationMathematics and Statisticssymbolsinformation dynamicsInformation dynamics; Information transfer; Multiscale entropy; Multivariate time series analysis; Redundancy and synergy; State space models; Vector autoregressive models; Physics and Astronomy (all)information dynamics; information transfer; multiscale entropy; multivariate time series analysis; redundancy and synergy; state space models; vector autoregressive modelsMultivariate time series analysiMathematics - Statistics Theorylcsh:AstrophysicsStatistics Theory (math.ST)Statistics - ApplicationsMethodology (stat.ME)symbols.namesakePhysics and Astronomy (all)0103 physical scienceslcsh:QB460-466FOS: Mathematicsinformation transferRelevance (information retrieval)Applications (stat.AP)Transfer Entropy010306 general physicsGaussian processStatistics - MethodologyState space modelstate space modelsmultivariate time series analysisredundancy and synergyvector autoregressive modelsInformation dynamicVector autoregressive modelSettore ING-INF/06 - Bioingegneria Elettronica E InformaticaTransfer entropylcsh:Qlcsh:PhysicsEntropy
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Multiscale partial information decomposition of dynamic processes with short and long-range correlations: theory and application to cardiovascular co…

2022

Abstract Objective. In this work, an analytical framework for the multiscale analysis of multivariate Gaussian processes is presented, whereby the computation of Partial Information Decomposition measures is achieved accounting for the simultaneous presence of short-term dynamics and long-range correlations. Approach. We consider physiological time series mapping the activity of the cardiac, vascular and respiratory systems in the field of Network Physiology. In this context, the multiscale representation of transfer entropy within the network of interactions among Systolic arterial pressure (S), respiration (R) and heart period (H), as well as the decomposition into unique, redundant and s…

FOS: Computer and information sciencesmultivariate time seriesPhysiologyEntropyRespirationBiomedical EngineeringBiophysicsheart rate variabilitytransfer entropyredundancy and synergyBlood PressureHeartQuantitative Biology - Quantitative MethodsCardiovascular SystemMethodology (stat.ME)Heart RatePhysiology (medical)FOS: Biological sciencesCardiovascular controlSettore ING-INF/06 - Bioingegneria Elettronica E Informaticavector autoregressive fractionally integrated (VARFI) modelsHumansQuantitative Methods (q-bio.QM)Statistics - MethodologyPhysiological measurement
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Information Decomposition in Multivariate Systems: Definitions, Implementation and Application to Cardiovascular Networks

2016

The continuously growing framework of information dynamics encompasses a set of tools, rooted in information theory and statistical physics, which allow to quantify different aspects of the statistical structure of multivariate processes reflecting the temporal dynamics of complex networks. Building on the most recent developments in this field, this work designs a complete approach to dissect the information carried by the target of a network of multiple interacting systems into the new information produced by the system, the information stored in the system, and the information transferred to it from the other systems; information storage and transfer are then further decomposed into amou…

Information transferDynamical systems theoryComputer scienceGeneral Physics and Astronomylcsh:AstrophysicsInformation theorycomputer.software_genreMachine learning01 natural sciencesEntropy - Cardiorespiratory interactions - Dynamical systems -cardiovascular interactions03 medical and health sciencessymbols.namesake0302 clinical medicinelcsh:QB460-4660103 physical sciencesinformation transferEntropy (information theory)lcsh:Science010306 general physicsGaussian processautoregressive processesmultivariate time series analysisbusiness.industryautonomic nervous systemredundancy and synergycardiorespiratory interactionsdynamical systemsComplex networkNetwork dynamicslcsh:QC1-999autonomic nervous system; autoregressive processes; cardiorespiratory interactions; cardiovascular interactions; Granger causality; dynamical systems; information dynamics; information transfer; redundancy and synergy; multivariate time series analysisAutoregressive modelSettore ING-INF/06 - Bioingegneria Elettronica E InformaticaGranger causalitysymbolslcsh:QArtificial intelligenceData mininginformation dynamicsbusinesscomputerlcsh:Physics030217 neurology & neurosurgeryEntropy; Volume 19; Issue 1; Pages: 5
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Basic cardiovascular variability signals: mutual directed interactions explored in the information domain.

2017

The study of short-term cardiovascular interactions is classically performed through the bivariate analysis of the interactions between the beat-to-beat variability of heart period (RR interval from the ECG) and systolic blood pressure (SBP). Recent progress in the development of multivariate time series analysis methods is making it possible to explore how directed interactions between two signals change in the context of networks including other coupled signals. Exploiting these advances, the present study aims at assessing directional cardiovascular interactions among the basic variability signals of RR, SBP and diastolic blood pressure (DBP), using an approach which allows direct compar…

MaleMultivariate statisticsAdolescentPhysiologySystole0206 medical engineeringBiomedical EngineeringBiophysicsContext (language use)Blood Pressure02 engineering and technologyBivariate analysisBaroreflex03 medical and health sciencesElectrocardiography0302 clinical medicineinformation domainDiastoleHeart RatePhysiology (medical)StatisticsHumansbaroreflexMathematicsResting state fMRIheart rate variabilityMultivariate time series analysiscomplex system020601 biomedical engineeringcardiovascular oscillationBlood pressureBiophysicInformation domainSettore ING-INF/06 - Bioingegneria Elettronica E InformaticaFemaleblood pressure variability030217 neurology & neurosurgeryHumancirculatory and respiratory physiologyPhysiological measurement
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Extended Granger causality: a new tool to identify the structure of physiological networks.

2015

Granger causality (GC) is a very popular tool for assessing the presence of directional interactions between two time series of a multivariate data set. In its original formulation, GC does not account for zero-lag correlations possibly existing between the observed time series. In the present study we compare the GC with a novel measure, termed extended GC (eGC), able to capture instantaneous causal relationships. We present a two-step procedure for the practical estimation of eGC based on first detecting the existence of zero-lag correlations, and then assigning them to one of the two possible causal directions using pairwise measures of non-Gaussianity. The proposed method was validated …

MaleMultivariate statisticsMultivariate analysiscardiovascular interactioncerebral autoregulationPhysiologyUltrasonography Doppler TranscranialPostureBiomedical EngineeringBiophysicsinstantaneous effectCerebral autoregulationSyncopeElectrocardiographyYoung AdultGranger causalityHeart RatePhysiology (medical)Statisticsmultivariate time serieHumansArterial PressureComputer SimulationRepresentation (mathematics)PhotoplethysmographyMathematicsSeries (mathematics)Regression analysisSignal Processing Computer-AssistedBaroreflexBiophysicCerebrovascular CirculationSettore ING-INF/06 - Bioingegneria Elettronica E InformaticaMultivariate AnalysisRegression AnalysisPairwise comparisonFemaleAlgorithmsBlood Flow VelocityPhysiological measurement
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Linear and non-linear brain-heart and brain-brain interactions during sleep.

2015

In this study, the physiological networks underlying the joint modulation of the parasympathetic component of heart rate variability (HRV) and of the different electroencephalographic (EEG) rhythms during sleep were assessed using two popular measures of directed interaction in multivariate time series, namely Granger causality (GC) and transfer entropy (TE). Time series representative of cardiac and brain activities were obtained in 10 young healthy subjects as the normalized high frequency (HF) component of HRV and EEG power in the δ, θ, α, σ, and β bands, measured during the whole duration of sleep. The magnitude and statistical significance of GC and TE were evaluated between each …

MaleTime FactorsAdolescentPhysiologyBiomedical EngineeringBiophysicsInformation TheoryElectroencephalographyModels BiologicalSurrogate dataEntropy estimationElectrocardiographyYoung AdultHeart RatePhysiology (medical)StatisticsmedicineHeart rate variabilitymultivariate time serieHumansMathematicsmedicine.diagnostic_testDimensionality reductionLinear modeltransfer entropyBrainRegression analysisElectroencephalographySignal Processing Computer-Assistedphysiological networkBiophysicNonlinear DynamicsSettore ING-INF/06 - Bioingegneria Elettronica E InformaticaMultivariate AnalysisLinear ModelsTransfer entropyBiological systemSleepPhysiological measurement
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Information decomposition in the frequency domain: a new framework to study cardiovascular and cardiorespiratory oscillations

2021

While cross-spectral and information-theoretic approaches are widely used for the multivariate analysis of physiological time series, their combined utilization is far less developed in the literature. This study introduces a framework for the spectral decomposition of multivariate information measures, which provides frequency-specific quantifications of the information shared between a target and two source time series and of its expansion into amounts related to how the sources contribute to the target dynamics with unique, redundant and synergistic information. The framework is illustrated in simulations of linearly interacting stochastic processes, showing how it allows us to retrieve …

Multivariate statisticsMultivariate analysisComputer scienceGeneral MathematicsGeneral Physics and AstronomyBlood PressureCardiovascular SystemMatrix decompositionHeart RateDecomposition (computer science)HumansHeart rate variabilityStatistical physicsSeries (mathematics)Stochastic processRespirationautonomic nervous systemGeneral EngineeringMultivariate time series analysisheart rate variabilityredundancy and synergyCardiorespiratory fitnesscoherence function multivariate time-series analysiTerm (time)Autonomic nervous systemInformation dynamicFrequency domainMultivariate AnalysisBiological system
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